Package: grex 1.9

grex: Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data

Convert 'Ensembl' gene identifiers from Genotype-Tissue Expression (GTEx) data to identifiers in other annotation systems, including 'Entrez', 'HGNC', and 'UniProt'.

Authors:Nan Xiao [aut, cre], Gao Wang [aut], Lei Sun [aut]

grex_1.9.tar.gz
grex_1.9.zip(r-4.5)grex_1.9.zip(r-4.4)grex_1.9.zip(r-4.3)
grex_1.9.tgz(r-4.4-any)grex_1.9.tgz(r-4.3-any)
grex_1.9.tar.gz(r-4.5-noble)grex_1.9.tar.gz(r-4.4-noble)
grex_1.9.tgz(r-4.4-emscripten)grex_1.9.tgz(r-4.3-emscripten)
grex.pdf |grex.html✨
grex/json (API)
NEWS

# Install 'grex' in R:
install.packages('grex', repos = c('https://nanxstats.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/nanxstats/grex/issues

Datasets:
  • gtexv6 - Ensembl IDs from GTEx V6 Gene Read Count Data
  • gtexv6p - Ensembl IDs from GTEx V6p Gene Read Count Data
  • gtexv7 - Ensembl IDs from GTEx V7 Gene Read Count Data

On CRAN:

bioinformaticsgene-expressiongenotype-tissue-expressiongtex

2 exports 8 stars 1.33 score 0 dependencies 22 scripts 204 downloads

Last updated 3 years agofrom:ae603eb590. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 26 2024
R-4.5-winOKAug 26 2024
R-4.5-linuxOKAug 26 2024
R-4.4-winOKAug 26 2024
R-4.4-macOKAug 26 2024
R-4.3-winOKAug 26 2024
R-4.3-macOKAug 26 2024

Exports:cleanidgrex

Dependencies:

Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data

Nan Xiao <https://nanx.me> Gao Wang <https://www.tigerwang.org> Lei Sun <[email protected]>

Rendered fromgrex.Rmdusingknitr::rmarkdownon Aug 26 2024.

Last update: 2021-12-21
Started: 2016-06-11